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Proscan GmbH proscan version 1.7
Proscan Version 1.7, supplied by Proscan GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/proscan%3A+version+1%2E7/proscan+version+1+7/pmc02797528-72-20-19
Average 90 stars, based on 1 article reviews
proscan version 1.7 - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Extensive length variation in the ribosomal DNA intergenic spacer of yellow perch (Perca flavescens).
Article Snippet: Several Open Source programs were used for IGS sequence analysis: The Emboss programs for GC content (Isochore) and CpG identification (Cpgplot and Newcpgreport) (Rice et al. 2000); Poly(A) Signal Miner to predict sequence poly(A) signals (Liu et al. 2003); and Proscan: version 1.7 to predict promotor regions based on scoring homologies with putative eukaryotic Pol II promoter sequences (Prestridge 1995).

Article Title: BIOINFORMATICS, TISSUE DISTRIBUTION, AND SUBCELLULAR LOCALIZATION ANALYSES OF FK506 BINDING PROTEIN 12B FROM SILKWORMS.
Article Snippet: FK506 binding proteins (FKBPs) are intracellular receptors of the immunosuppressant FK506 and play important roles in the correct folding of new proteins and the self-assembly of biological macromolecules.. FKBP12 is a member of the FKBP family that is widely expressed and highly conserved in many species.. In this study, we identified the complete cDNA sequence encoding the FKBP12 ortholog in Bombyx mori, named Bm-FKBP12B (GenBank accession no. DQ443423).

Article Title: 5-Aza-2′-deoxycytidine advances the epithelial–mesenchymal transition of breast cancer cells by demethylating Sipa1 promoter-proximal elements
Article Snippet: Promoter 2.0 Prediction ( www.cbs.dtu.dk/services/Promoter/ ), McPromoter (tools.genome.duke.edu/generagulation/McPromoter), Neural Network Promoter Prediction ( www.fruitfly.org/seq_tools/promoter.html ) and PROSCAN Version 1.7 ( www-bimas.cit.nih.gov/molbio/proscan/ ), were used to further evaluate the promoter potential.

Article Title: Epigenetic Regulation of SNAP25 Prevents Progressive Glutamate Excitotoxicty in Hypoxic CA3 Neurons.
Article Snippet: Exposure to global hypoxia and ischemia has been reported to cause neurodegeneration in the hippocampus with CA3 neurons.. This neuronal damage is progressive during the initial phase of exposure but maintains a plateau on prolonged exposure.. The present study on Sprague Dawley rats aimed at understanding the underlying molecular and epigenetic mechanisms that lead to hypoxic adaptation of CA3 neurons on prolonged exposure to a global hypoxia.

Article Title: Over-expressed lncRNA HOTAIRM1 promotes tumor growth and invasion through up-regulating HOXA1 and sequestering G9a/EZH2/Dnmts away from the HOXA1 gene in glioblastoma multiforme
Article Snippet: Predicts promoter region was done using the PROSCAN Version 1.7 based on scoring homologies with putative eukaryotic Pol II promoter sequences (Fig. ).

Article Title: Metastasis-suppressing NID2 , an epigenetically-silenced gene, in the pathogenesis of nasopharyngeal carcinoma and esophageal squamous cell carcinoma
Article Snippet: PROSCAN Version 1.7, developed by Dr. Dan Prestridge (Advanced Biosciences Computing Center, University of Minnestota) was used to predict the promoter sequences from the above region. (http://www-bimas.cit.nih.gov/cgi-bin/molbio/proscan) Sequences of 251bp highlighted in grey were the putative promoter sequences of NID2, which encompass the TSS200 and 5’UTR region of the first exon. (chr14: 52535751-52536001) Supplementary Figure S6: MethPrimer was used to predict the CpG island present in the TSS200/5’UTR region of NID2 and to design the primers for clonal bisulfite sequencing.

Article Title: Pristane induces autophagy in macrophages, promoting a STAT1-IRF1-TLR3 pathway and arthritis.
Article Snippet: a Department of Biochemistry and Molecular Biology, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, Shaanxi 710061, China b Key Laboratory of Environment and Genes Related to Diseases (Xi'an Jiaotong University), Ministry of Education, Xi'an, Shaanxi 710061, China c Division of Medical Inflammation Research, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-171 77 Stockholm, Sweden



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